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\n \n\n \n \n Endo, T., Ueno, K., Yonezawa, K., Mineta, K., Hotta, K., Satou, Y., Yamada, L., Ogasawara, M., Takahashi, H., Nakajima, A., Nakachi, M., Nomura, M., Yaguchi, J., Sasakura, Y., Yamasaki, C., Sera, M., Yoshizawa, A. C., Imanishi, T., Taniguchi, H., & Inaba, K.\n\n\n \n \n \n \n \n CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality.\n \n \n \n \n\n\n \n\n\n\n Nucleic Acids Research, 39(Database): D807–D814. January 2011.\n \n\n\n\n
\n\n\n\n \n \n \"CIPROPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{endo_cipro_2011,\n\ttitle = {{CIPRO} 2.5: \\textit{{Ciona} intestinalis} protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality},\n\tvolume = {39},\n\tissn = {0305-1048, 1362-4962},\n\tshorttitle = {{CIPRO} 2.5},\n\turl = {https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkq1144},\n\tdoi = {10.1093/nar/gkq1144},\n\tlanguage = {en},\n\tnumber = {Database},\n\turldate = {2021-07-27},\n\tjournal = {Nucleic Acids Research},\n\tauthor = {Endo, T. and Ueno, K. and Yonezawa, K. and Mineta, K. and Hotta, K. and Satou, Y. and Yamada, L. and Ogasawara, M. and Takahashi, H. and Nakajima, A. and Nakachi, M. and Nomura, M. and Yaguchi, J. and Sasakura, Y. and Yamasaki, C. and Sera, M. and Yoshizawa, A. C. and Imanishi, T. and Taniguchi, H. and Inaba, K.},\n\tmonth = jan,\n\tyear = {2011},\n\tpages = {D807--D814},\n}\n\n
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\n \n\n \n \n Inaba, K.\n\n\n \n \n \n \n \n Sperm flagella: comparative and phylogenetic perspectives of protein components.\n \n \n \n \n\n\n \n\n\n\n Molecular Human Reproduction, 17(8): 524–538. August 2011.\n \n\n\n\n
\n\n\n\n \n \n \"SpermPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{inaba_sperm_2011,\n\ttitle = {Sperm flagella: comparative and phylogenetic perspectives of protein components},\n\tvolume = {17},\n\tissn = {1360-9947, 1460-2407},\n\tshorttitle = {Sperm flagella},\n\turl = {https://academic.oup.com/molehr/article-lookup/doi/10.1093/molehr/gar034},\n\tdoi = {10.1093/molehr/gar034},\n\tlanguage = {en},\n\tnumber = {8},\n\turldate = {2021-07-27},\n\tjournal = {Molecular Human Reproduction},\n\tauthor = {Inaba, K.},\n\tmonth = aug,\n\tyear = {2011},\n\tpages = {524--538},\n}\n
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\n \n\n \n \n Nakachi, M., Nakajima, A., Nomura, M., Yonezawa, K., Ueno, K., Endo, T., & Inaba, K.\n\n\n \n \n \n \n \n Proteomic profiling reveals compartment-specific, novel functions of ascidian sperm proteins: Proteomics of ascidian sperm compartments.\n \n \n \n \n\n\n \n\n\n\n Molecular Reproduction and Development, 78(7): 529–549. July 2011.\n \n\n\n\n
\n\n\n\n \n \n \"ProteomicPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{nakachi_proteomic_2011,\n\ttitle = {Proteomic profiling reveals compartment-specific, novel functions of ascidian sperm proteins: {Proteomics} of ascidian sperm compartments},\n\tvolume = {78},\n\tissn = {1040452X},\n\tshorttitle = {Proteomic profiling reveals compartment-specific, novel functions of ascidian sperm proteins},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1002/mrd.21341},\n\tdoi = {10.1002/mrd.21341},\n\tlanguage = {en},\n\tnumber = {7},\n\turldate = {2021-07-27},\n\tjournal = {Molecular Reproduction and Development},\n\tauthor = {Nakachi, Mia and Nakajima, Ayako and Nomura, Mamoru and Yonezawa, Kouki and Ueno, Keisuke and Endo, Toshinori and Inaba, Kazuo},\n\tmonth = jul,\n\tyear = {2011},\n\tpages = {529--549},\n}\n\n
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\n \n\n \n \n Yaguchi, S., Yaguchi, J., Wei, Z., Jin, Y., Angerer, L. M., & Inaba, K.\n\n\n \n \n \n \n \n Fez function is required to maintain the size of the animal plate in the sea urchin embryo.\n \n \n \n \n\n\n \n\n\n\n Development, 138(19): 4233–4243. October 2011.\n \n\n\n\n
\n\n\n\n \n \n \"FezPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{yaguchi_fez_2011,\n\ttitle = {Fez function is required to maintain the size of the animal plate in the sea urchin embryo},\n\tvolume = {138},\n\tissn = {1477-9129, 0950-1991},\n\turl = {https://journals.biologists.com/dev/article/138/19/4233/44569/Fez-function-is-required-to-maintain-the-size-of},\n\tdoi = {10.1242/dev.069856},\n\tabstract = {Partitioning ectoderm precisely into neurogenic and non-neurogenic regions is an essential step for neurogenesis of almost all bilaterian embryos. Although it is widely accepted that antagonism between BMP and its inhibitors primarily sets up the border between these two types of ectoderm, it is unclear how such extracellular, diffusible molecules create a sharp and precise border at the single-cell level. Here, we show that Fez, a zinc finger protein, functions as an intracellular factor attenuating BMP signaling specifically within the neurogenic region at the anterior end of sea urchin embryos, termed the animal plate. When Fez function is blocked, the size of this neurogenic ectoderm becomes smaller than normal. However, this reduction is rescued in Fez morphants simply by blocking BMP2/4 translation, indicating that Fez maintains the size of the animal plate by attenuating BMP2/4 function. Consistent with this, the gradient of BMP activity along the aboral side of the animal plate, as measured by pSmad1/5/8 levels, drops significantly in cells expressing Fez and this steep decline requires Fez function. Our data reveal that this neurogenic ectoderm produces an intrinsic system that attenuates BMP signaling to ensure the establishment of a stable, well-defined neural territory, the animal plate.},\n\tlanguage = {en},\n\tnumber = {19},\n\turldate = {2021-07-27},\n\tjournal = {Development},\n\tauthor = {Yaguchi, Shunsuke and Yaguchi, Junko and Wei, Zheng and Jin, Yinhua and Angerer, Lynne M. and Inaba, Kazuo},\n\tmonth = oct,\n\tyear = {2011},\n\tpages = {4233--4243},\n}\n\n
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\n Partitioning ectoderm precisely into neurogenic and non-neurogenic regions is an essential step for neurogenesis of almost all bilaterian embryos. Although it is widely accepted that antagonism between BMP and its inhibitors primarily sets up the border between these two types of ectoderm, it is unclear how such extracellular, diffusible molecules create a sharp and precise border at the single-cell level. Here, we show that Fez, a zinc finger protein, functions as an intracellular factor attenuating BMP signaling specifically within the neurogenic region at the anterior end of sea urchin embryos, termed the animal plate. When Fez function is blocked, the size of this neurogenic ectoderm becomes smaller than normal. However, this reduction is rescued in Fez morphants simply by blocking BMP2/4 translation, indicating that Fez maintains the size of the animal plate by attenuating BMP2/4 function. Consistent with this, the gradient of BMP activity along the aboral side of the animal plate, as measured by pSmad1/5/8 levels, drops significantly in cells expressing Fez and this steep decline requires Fez function. Our data reveal that this neurogenic ectoderm produces an intrinsic system that attenuates BMP signaling to ensure the establishment of a stable, well-defined neural territory, the animal plate.\n
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\n \n\n \n \n Zhu, L., & Inaba, K.\n\n\n \n \n \n \n \n Lipid rafts function in Ca $^{\\textrm{2+}}$ signaling responsible for activation of sperm motility and chemotaxis in the ascidian Ciona intestinalis: Lipid rafts and sperm motility.\n \n \n \n \n\n\n \n\n\n\n Molecular Reproduction and Development, 78(12): 920–929. December 2011.\n \n\n\n\n
\n\n\n\n \n \n \"LipidPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{zhu_lipid_2011,\n\ttitle = {Lipid rafts function in {Ca} $^{\\textrm{2+}}$ signaling responsible for activation of sperm motility and chemotaxis in the ascidian \\textit{{Ciona} intestinalis}: {Lipid} rafts and sperm motility},\n\tvolume = {78},\n\tissn = {1040452X},\n\tshorttitle = {Lipid rafts function in {Ca} $^{\\textrm{2+}}$ signaling responsible for activation of sperm motility and chemotaxis in the ascidian \\textit{{Ciona} intestinalis}},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1002/mrd.21382},\n\tdoi = {10.1002/mrd.21382},\n\tlanguage = {en},\n\tnumber = {12},\n\turldate = {2021-07-27},\n\tjournal = {Molecular Reproduction and Development},\n\tauthor = {Zhu, Lihong and Inaba, Kazuo},\n\tmonth = dec,\n\tyear = {2011},\n\tpages = {920--929},\n}\n\n
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